After more research I realized there was no way to modify the disk after an install and I had no option other than to repave the box (fortunately I hadn't done much on the install).
Below are the steps I used to convert the MBR to GPT, ready to install my OS.
- Changed BIOS to UEFI (this took forever for me to figure out. UEFI is tied to GPT and even though when booting to BIOS, it will let you convert a disk to GPT, it won't stay that way during the install)
- Start the Windows Server (or other OS) install, but get to a command line (in Server 2012, choose the option to repair an existing installation > command line)
- Enter the following commands
- DISKPART
- LIST DISK
- SELECT DISK 0 (make sure that's the disk you want to convert)
- CLEAN
- EXIT
- DISKPART
- LIST DISK
- SELECT DISK 0
- CONVERT GPT
- EXIT
- Proceed with your installation (for Windows Server, at this point, the installation window has disappeared. No worries, just cd .. up a directory, and then type setup.exe to start the setup again.
After this, you will be able to use all of your disk space.
Resources;
http://www.howtogeek.com/193669/whats-the-difference-between-gpt-and-mbr-when-partitioning-a-drive/
http://technet.microsoft.com/en-us/library/cc738416(v=ws.10).aspx